PUBLICATIONS

Full list of Publications

 

  • Van Ninh, D.M. Calcagno, …, E. Adler, J. Hu, K. Zhang, K.L. Christmas, Z. Fu, Bogdan Bintu, Kevin R. King. Spatially cluster type I interferon responses at injury borderzones. Nature (2024) https://doi.org/10.1038/s41586-024-07806-1
  • Roy Maimon, Carlos Chillon-Marinas, Sonia Vazquez-Sanchez, Colin Kern, Kresna Jenie, Ksenia Malukhina, Stephen Moore, Jess Cui, Alexander Gonginashvili, Siavash Moghadami, Alexander Monell, Melissa McAlonis, Paymaan Jafar-Nejad, Chrisitne Hong, C Frank Bennett, John Ravits, Quan Zhu, Don W Cleveland, Bogdan Bintu. Re-activation of neurogenic niches in aging brain. bioRxiv (2024). https://doi.org/10.1101/2024.01.27.575940 
  • Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi. Super-resolution SRS microscopy with A-PoD. Nature Methods (2023). https://doi.org/10.1038/s41592-023-01779-1
  • Jun-Han Su, Pu Zheng, Seon S. Kinrot, Bogdan Bintu*, and Xiaowei Zhuang*. Genome-Scale Imaging of the 3D Organization and Transcriptional Activity of Chromatin. Cell (2020) *co-corresponding authors https://doi.org/10.1016/j.cell.2020.07.032
  • Hui Huang, Quan Zhu, Adam Jussila, Yuanyuan Han, Bogdan Bintu, Colin Kern, Mattia Conte, Yanxiao Zhang, Simona Bianco, Andrea M. Chiariello, Miao Yu, Rong Hu, Melodi Tastemel, Ivan Juric, Ming Hu, Mario Nicodemi, Xiaowei Zhuang & Bing Ren. CTCF mediates dosage-and sequence-context-dependent transcriptional insulation by forming local chromatin domains. Nature Genetics (2021). https://doi.org/10.1038/s41588-021-00863-6
  • B. Bintu, L. Mateo, J. Su, N. Sinnott-Armstrong, M. Parker, S. Kinrot, K. Yamaya, A. Boettiger, X. Zhuang. 2018. Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells.  Science (2018) 10.1126/science.aau1783 
  • Y.E. Antebi, J.M. Linton, H. Klumpe, B. Bintu, M. Gong, C. Su, R. McCardell, M. B. Elowitz. Combinatorial signal perception in the BMP pathway. Cell (2017)10.1016/j.cell.2017.08.015
  • B.J. Beliveau, A.N. Boettiger, G. Nir, B. Bintu, P. Yin, X. Zhuang, C.T. Wu. In situ super-resolution imaging of genomic DNA with oligoSTORM and oligoDNA-PAINT. Super-Resolution Microscopy (2017)10.1007/978-1-4939-7265-4_19
  • A.N. Boettiger, B. Bintu, J.R. Moffitt, S. Wang, B.J. Beliveau, G. Fudenberg, M. Imakaev, L.A. Mirny, C.T. Wu, X. Zhuang. 2016. Super-resolution imaging reveals distinct chromatin folding for different epigenetic states. Nature (2016) https://doi.org/10.1038/nature16496
  • S. Wang, J.H. Su, B.J. Beliveau, B. Bintu, J.R. Moffitt, C.T. Wu, X. Zhuang. 2016. Spatial organization of chromatin domains and compartments in single chromosomes. Science (2016)10.1126/science.aaf8084

 

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